Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haaap family serine/threonine permease | EDI29_07060 | Not Available | Positive | 1566810 - 1568099 | 46938.0 |
| l-serine ammonia-lyase | EDI29_07065 | Not Available | Positive | 1568350 - 1569717 | 49609.9 |
| xre family transcriptional regulator | EDI29_07070 | Not Available | Negative | 1569793 - 1570230 | 16310.8 |
| hypothetical protein | EDI29_07075 | Not Available | Positive | 1570746 - 1571210 | 16600.6 |
| duf4879 domain-containing protein | EDI29_07080 | Not Available | Negative | 1571257 - 1571820 | 20217.7 |
| phosphate abc transporter atp-binding protein | EDI29_07085 | Not Available | Negative | 1572049 - 1572864 | 30699.1 |
| phosphate abc transporter permease psta | EDI29_07090 | Not Available | Negative | 1572880 - 1574532 | 61296.8 |
| abc transporter permease subunit | EDI29_07095 | Not Available | Negative | 1574529 - 1576697 | 79709.4 |
| polyphosphate kinase 1 | EDI29_07100 | Not Available | Positive | 1577055 - 1579127 | 80192.6 |
| exopolyphosphatase | EDI29_07105 | Not Available | Positive | 1579127 - 1580662 | 58156.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
