Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide sugar dehydrogenase | EDI29_07010 | Not Available | Negative | 1555964 - 1557130 | 43889.7 |
| ggdef domain-containing protein | EDI29_07015 | Not Available | Positive | 1557684 - 1559231 | 57899.1 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | EDI29_07020 | Not Available | Positive | 1559339 - 1560202 | 30934.4 |
| ribosome-associated protein ybcj | EDI29_07025 | Not Available | Positive | 1560239 - 1560451 | 7589.11 |
| cysteine--trna ligase | EDI29_07030 | Not Available | Negative | 1560544 - 1561929 | 52458.1 |
| doxx family protein | EDI29_07035 | Not Available | Negative | 1562218 - 1562649 | 15476.5 |
| peptidylprolyl isomerase b | EDI29_07040 | Not Available | Positive | 1563072 - 1563566 | 18064.2 |
| udp-2,3-diacylglucosamine diphosphatase | EDI29_07045 | Not Available | Positive | 1563577 - 1564299 | 27580.3 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | EDI29_07050 | Not Available | Positive | 1564478 - 1564987 | 17505.1 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | EDI29_07055 | Not Available | Positive | 1564984 - 1566054 | 39395.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
