Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter substrate-binding protein | EDI29_06960 | Not Available | Positive | 1544500 - 1545516 | 36405.1 |
| iron abc transporter permease | EDI29_06965 | Not Available | Positive | 1545646 - 1547223 | 56641.1 |
| abc transporter atp-binding protein | EDI29_06970 | Not Available | Positive | 1547226 - 1548266 | 37302.9 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf | EDI29_06975 | Not Available | Negative | 1548297 - 1548689 | 14214.1 |
| 4-amino-4-deoxy-l-arabinose-phospho-udp flippase | EDI29_06980 | Not Available | Negative | 1548689 - 1549030 | 12741.3 |
| lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferase | EDI29_06985 | Not Available | Negative | 1549027 - 1550697 | 62617.7 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | EDI29_06990 | Not Available | Negative | 1550715 - 1551608 | 33549.1 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | EDI29_06995 | Not Available | Negative | 1551605 - 1553605 | 74660.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | EDI29_07000 | Not Available | Negative | 1553602 - 1554585 | 36479.5 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | EDI29_07005 | Not Available | Negative | 1554578 - 1555726 | 42119.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
