Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein, puls/outs family | EDI29_06855 | Not Available | Negative | 1525467 - 1525880 | 14618.3 |
| alanine transaminase | EDI29_06860 | Not Available | Negative | 1525989 - 1527230 | 46041.4 |
| l-ala-d/l-glu epimerase | EDI29_06865 | Not Available | Positive | 1527598 - 1528578 | 35768.9 |
| d-amino-acid transaminase | EDI29_06870 | Not Available | Positive | 1528621 - 1529481 | 31991.2 |
| mechanosensitive ion channel family protein | EDI29_06875 | Not Available | Negative | 1529558 - 1532011 | 88273.8 |
| Trna-arg | Not Available | Not Available | Positive | 1532409 - 1532485 | Not Available |
| hypothetical protein | EDI29_06890 | Not Available | Negative | 1532881 - 1533183 | 10858.2 |
| nudix domain-containing protein | EDI29_06895 | Not Available | Negative | 1533611 - 1534009 | 14577.5 |
| duf1852 domain-containing protein | EDI29_06900 | Not Available | Positive | 1534573 - 1535550 | 37570.9 |
| methionine synthase | EDI29_06905 | Not Available | Positive | 1535578 - 1536609 | 38607.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
