Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspi | EDI29_06805 | Not Available | Negative | 1513532 - 1513897 | 13801.5 |
| type ii secretion system protein gsph | EDI29_06810 | Not Available | Negative | 1513894 - 1514460 | 21322.6 |
| type ii secretion system protein gspg | EDI29_06815 | Not Available | Negative | 1514547 - 1515002 | 16980.3 |
| type ii secretion system protein gspf | EDI29_06820 | Not Available | Negative | 1515035 - 1516261 | 45211.8 |
| type ii secretion system protein gspe | EDI29_06825 | Not Available | Negative | 1516263 - 1517759 | 55297.0 |
| type ii secretion system protein gspd | EDI29_06830 | Not Available | Negative | 1517756 - 1519810 | 74306.6 |
| type ii secretion system protein gspc | EDI29_06835 | Not Available | Negative | 1519797 - 1520660 | 31067.8 |
| glycoside hydrolase family 28 protein | EDI29_06840 | Not Available | Negative | 1520711 - 1522690 | 71917.2 |
| pectate lyase | EDI29_06845 | Not Available | Negative | 1522827 - 1524395 | 57047.3 |
| general secretion pathway protein | EDI29_06850 | Not Available | Positive | 1524919 - 1525470 | 19696.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
