Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter permease | EDI29_06755 | Not Available | Negative | 1504363 - 1505382 | 36222.8 |
| hypothetical protein | EDI29_06760 | Not Available | Negative | 1505379 - 1506443 | 39882.1 |
| llm class flavin-dependent oxidoreductase | EDI29_06765 | Not Available | Positive | 1506779 - 1507804 | 37474.1 |
| membrane protein ypdk | EDI29_06770 | Not Available | Positive | 1508211 - 1508285 | 2909.8 |
| prepilin peptidase | EDI29_06775 | Not Available | Negative | 1508442 - 1509290 | 31327.0 |
| type ii secretion system protein n | EDI29_06780 | Not Available | Negative | 1509398 - 1510144 | 26740.4 |
| type ii secretion system protein m | EDI29_06785 | Not Available | Negative | 1510134 - 1510628 | 18908.6 |
| type ii secretion system protein gspl | EDI29_06790 | Not Available | Negative | 1510625 - 1511902 | 47762.7 |
| general secretion pathway protein gspk | EDI29_06795 | Not Available | Negative | 1511899 - 1512885 | 36642.0 |
| type ii secretion system protein gspj | EDI29_06800 | Not Available | Negative | 1512882 - 1513532 | 24838.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
