Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDI29_06605 | Not Available | Negative | 1472550 - 1473350 | 28192.3 |
| penicillin-insensitive murein endopeptidase | EDI29_06610 | Not Available | Negative | 1473360 - 1474205 | 31022.2 |
| chorismate synthase | EDI29_06615 | Not Available | Negative | 1474212 - 1475297 | 39184.6 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | EDI29_06620 | Not Available | Negative | 1475385 - 1476317 | 35247.7 |
| endonuclease smrb | EDI29_06625 | Not Available | Positive | 1476489 - 1477031 | 20434.5 |
| phosphohistidine phosphatase sixa | EDI29_06630 | Not Available | Negative | 1477115 - 1477597 | 17349.8 |
| scpu domain-containing protein | EDI29_06635 | Not Available | Positive | 1478536 - 1479087 | 18507.8 |
| scpu domain-containing protein | EDI29_06640 | Not Available | Positive | 1479271 - 1479807 | 18514.1 |
| molecular chaperone | EDI29_06645 | Not Available | Positive | 1479843 - 1480616 | 28811.9 |
| fimbrial biogenesis outer membrane usher protein | EDI29_06650 | Not Available | Positive | 1480675 - 1483041 | 86131.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
