Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | EDI29_06555 | Not Available | Negative | 1461499 - 1462161 | 24522.5 |
| trna pseudouridine(38-40) synthase trua | EDI29_06560 | Not Available | Negative | 1462356 - 1463180 | 30713.6 |
| aspartate-semialdehyde dehydrogenase | EDI29_06565 | Not Available | Negative | 1463207 - 1464217 | 35837.3 |
| 4-phosphoerythronate dehydrogenase pdxb | EDI29_06570 | Not Available | Negative | 1464347 - 1465483 | 41238.3 |
| dmt family transporter | EDI29_06575 | Not Available | Positive | 1465779 - 1466678 | 32581.5 |
| flagella biosynthesis regulator flk | EDI29_06580 | Not Available | Positive | 1466765 - 1468024 | 45512.4 |
| beta-ketoacyl-acp synthase i | EDI29_06585 | Not Available | Negative | 1468152 - 1469369 | 42622.7 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | EDI29_06590 | Not Available | Positive | 1469542 - 1471569 | 75068.6 |
| yfcl family protein | EDI29_06595 | Not Available | Negative | 1471659 - 1471943 | 10444.2 |
| elongation factor p hydroxylase | EDI29_06600 | Not Available | Negative | 1471977 - 1472522 | 20718.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
