Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf412 domain-containing protein | EDI29_06455 | Not Available | Negative | 1442535 - 1442993 | 17198.1 |
| acetate kinase | EDI29_06460 | Not Available | Positive | 1443444 - 1444646 | 43587.4 |
| phosphate acetyltransferase | EDI29_06465 | Not Available | Positive | 1444726 - 1446864 | 77086.8 |
| duf817 domain-containing protein | EDI29_06470 | Not Available | Positive | 1447007 - 1447852 | 32988.7 |
| nudix hydrolase yfcd | EDI29_06475 | Not Available | Negative | 1447914 - 1448564 | 24322.2 |
| phosphodiesterase | EDI29_06480 | Not Available | Negative | 1448688 - 1449239 | 20393.6 |
| gsh-dependent disulfide bond oxidoreductase | EDI29_06485 | Not Available | Positive | 1449491 - 1450117 | 23971.4 |
| dihydroneopterin triphosphate 2'-epimerase | EDI29_06490 | Not Available | Positive | 1450242 - 1450613 | 14379.2 |
| tigr01777 family protein | EDI29_06495 | Not Available | Positive | 1450629 - 1451534 | 33121.9 |
| histidine abc transporter atp-binding protein hisp | EDI29_06500 | Not Available | Negative | 1451713 - 1452486 | 28731.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
