Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit c/d | EDI29_06405 | Not Available | Negative | 1432044 - 1433843 | 68880.7 |
| nadh-quinone oxidoreductase subunit b | EDI29_06410 | Not Available | Negative | 1433942 - 1434616 | 25607.8 |
| nadh-quinone oxidoreductase subunit a | EDI29_06415 | Not Available | Negative | 1434634 - 1435074 | 16186.0 |
| hypothetical protein | EDI29_06420 | Not Available | Positive | 1435331 - 1435525 | 7140.61 |
| transcriptional regulator lrha | EDI29_06425 | Not Available | Negative | 1435750 - 1436700 | 34627.9 |
| pyridoxal phosphate-dependent aminotransferase | EDI29_06430 | Not Available | Positive | 1437201 - 1438415 | 45490.9 |
| 5'-deoxynucleotidase | EDI29_06435 | Not Available | Positive | 1438558 - 1439157 | 22994.7 |
| slc13 family permease | EDI29_06440 | Not Available | Negative | 1439187 - 1441019 | 66365.7 |
| sugar phosphatase | EDI29_06445 | Not Available | Negative | 1441197 - 1441853 | 23573.2 |
| yfbu family protein | EDI29_06450 | Not Available | Negative | 1441875 - 1442369 | 19484.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
