Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome d ubiquinol oxidase subunit ii | EDI29_06255 | Not Available | Positive | 1399686 - 1400825 | 41987.9 |
| cytochrome bd-i oxidase subunit cydx | EDI29_06260 | Not Available | Positive | 1400844 - 1400948 | 3722.51 |
| duf202 domain-containing protein | EDI29_06265 | Not Available | Positive | 1401090 - 1401455 | 13568.9 |
| duf202 domain-containing protein | EDI29_06270 | Not Available | Positive | 1401459 - 1401779 | 11717.8 |
| formate dehydrogenase accessory protein fdhe | EDI29_06275 | Not Available | Negative | 1401839 - 1402768 | 34627.0 |
| hypothetical protein | EDI29_06280 | Not Available | Positive | 1402755 - 1402946 | 7201.13 |
| plp-dependent aminotransferase family protein | EDI29_06285 | Not Available | Negative | 1403005 - 1404456 | 53759.6 |
| glutamine amidotransferase | EDI29_06290 | Not Available | Negative | 1404565 - 1405287 | 26526.6 |
| hypothetical protein | EDI29_06295 | Not Available | Negative | 1405493 - 1405981 | 19127.4 |
| hypothetical protein | EDI29_06300 | Not Available | Negative | 1406130 - 1406759 | 22297.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
