Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate reductase | EDI29_06200 | Not Available | Negative | 1382697 - 1385405 | 98595.4 |
| nitrite reductase small subunit nird | EDI29_06205 | Not Available | Negative | 1385402 - 1389589 | 151295.0 |
| abc transporter atp-binding protein | EDI29_06210 | Not Available | Negative | 1389609 - 1390403 | 29473.9 |
| nitrate abc transporter, permease protein | EDI29_06215 | Not Available | Negative | 1390414 - 1391328 | 33139.2 |
| nitrate abc transporter substrate-binding protein | EDI29_06220 | Not Available | Negative | 1391341 - 1392600 | 45630.4 |
| hypothetical protein | EDI29_06225 | Not Available | Negative | 1392902 - 1393084 | 6356.63 |
| antar domain-containing protein | EDI29_06230 | Not Available | Negative | 1393260 - 1394549 | 48468.2 |
| tail fiber protein | EDI29_06240 | Not Available | Positive | 1395639 - 1396937 | 46323.3 |
| tail fiber assembly protein | EDI29_06245 | Not Available | Positive | 1396937 - 1397554 | 22970.9 |
| cytochrome bd-i ubiquinol oxidase subunit cyda | EDI29_06250 | Not Available | Positive | 1398094 - 1399671 | 58614.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
