Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1963 domain-containing protein | EDI29_06150 | Not Available | Positive | 1368743 - 1370392 | 61292.5 |
| noncanonical pyrimidine nucleotidase, yjjg family | EDI29_06155 | Not Available | Negative | 1370480 - 1371175 | 25730.2 |
| mfs transporter | EDI29_06160 | Not Available | Negative | 1371172 - 1372404 | 42118.4 |
| decarboxylase | EDI29_06165 | Not Available | Positive | 1373236 - 1375626 | 89049.6 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | EDI29_06170 | Not Available | Positive | 1375623 - 1378160 | 92989.1 |
| lysr family transcriptional regulator | EDI29_06175 | Not Available | Negative | 1378538 - 1379358 | 30174.3 |
| nad/nadp octopine/nopaline dehydrogenase | EDI29_06180 | Not Available | Positive | 1379359 - 1380063 | 26261.7 |
| duf1456 family protein | EDI29_06185 | Not Available | Positive | 1380179 - 1380643 | 17804.9 |
| rpn family recombination-promoting nuclease/putative transposase | EDI29_06190 | Not Available | Negative | 1380728 - 1381672 | 36143.7 |
| uroporphyrinogen-iii c-methyltransferase | EDI29_06195 | Not Available | Negative | 1381838 - 1382671 | 29831.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
