Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkyl hydroperoxide reductase subunit c | EDI29_06050 | Not Available | Negative | 1343955 - 1344518 | 20868.6 |
| duf4153 domain-containing protein | EDI29_06055 | Not Available | Negative | 1344629 - 1346278 | 61513.8 |
| autotransporter domain-containing protein | EDI29_06060 | Not Available | Positive | 1346492 - 1349524 | 104674.0 |
| hypothetical protein | EDI29_06065 | Not Available | Positive | 1350103 - 1350900 | 28992.6 |
| hlyd family efflux transporter periplasmic adaptor subunit | EDI29_06070 | Not Available | Negative | 1351068 - 1352333 | 46410.5 |
| tolc family protein | EDI29_06075 | Not Available | Negative | 1352326 - 1353792 | 54597.6 |
| abc transporter permease | EDI29_06080 | Not Available | Negative | 1353785 - 1355032 | 43993.4 |
| abc transporter atp-binding protein | EDI29_06085 | Not Available | Negative | 1355025 - 1355726 | 25036.3 |
| hypothetical protein | EDI29_06090 | Not Available | Negative | 1355782 - 1356534 | 27235.7 |
| hypothetical protein | EDI29_06095 | Not Available | Negative | 1356734 - 1357201 | 16169.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
