Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftsh protease activity modulator hflk | EDI29_06000 | Not Available | Negative | 1330666 - 1331919 | 45582.3 |
| gtpase hflx | EDI29_06005 | Not Available | Negative | 1332016 - 1333296 | 48267.9 |
| rna chaperone hfq | EDI29_06010 | Not Available | Negative | 1333391 - 1333690 | 10864.7 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | EDI29_06015 | Not Available | Negative | 1333804 - 1334745 | 35088.3 |
| dna mismatch repair endonuclease mutl | EDI29_06020 | Not Available | Negative | 1334738 - 1336720 | 73086.8 |
| n-acetylmuramoyl-l-alanine amidase amib | EDI29_06025 | Not Available | Negative | 1336772 - 1338433 | 59082.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | EDI29_06030 | Not Available | Negative | 1338430 - 1338912 | 17440.8 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | EDI29_06035 | Not Available | Negative | 1338952 - 1340481 | 53814.7 |
| trna epoxyqueuosine(34) reductase queg | EDI29_06040 | Not Available | Positive | 1340627 - 1341766 | 43329.4 |
| alkyl hydroperoxide reductase subunit f | EDI29_06045 | Not Available | Negative | 1342263 - 1343825 | 55824.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
