Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribonuclease i | EDI29_05950 | Not Available | Positive | 1321573 - 1322271 | 26451.1 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | EDI29_05955 | Not Available | Positive | 1322390 - 1323124 | 26746.6 |
| glutathione synthase | EDI29_05960 | Not Available | Positive | 1323136 - 1324095 | 36025.4 |
| yqge/algh family protein | EDI29_05965 | Not Available | Positive | 1324170 - 1324733 | 20659.8 |
| holliday junction resolvase ruvx | EDI29_05970 | Not Available | Positive | 1324733 - 1325152 | 15234.2 |
| class 1 fructose-bisphosphatase | EDI29_05975 | Not Available | Negative | 1325274 - 1326278 | 36838.0 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | EDI29_05980 | Not Available | Positive | 1326448 - 1327833 | 50402.8 |
| adenylosuccinate synthase | EDI29_05985 | Not Available | Negative | 1327944 - 1329242 | 47061.6 |
| duf2065 domain-containing protein | EDI29_05990 | Not Available | Negative | 1329342 - 1329542 | 7347.54 |
| protease modulator hflc | EDI29_05995 | Not Available | Negative | 1329667 - 1330662 | 37473.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
