Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class ii fructose-bisphosphate aldolase | EDI29_05900 | Not Available | Negative | 1308599 - 1309675 | 39078.3 |
| phosphoglycerate kinase | EDI29_05905 | Not Available | Negative | 1309813 - 1310976 | 41167.6 |
| erythrose-4-phosphate dehydrogenase | EDI29_05910 | Not Available | Negative | 1311049 - 1312065 | 37197.3 |
| transketolase | EDI29_05915 | Not Available | Negative | 1312380 - 1314374 | 71817.9 |
| metalloprotease | EDI29_05920 | Not Available | Positive | 1314785 - 1315537 | 26799.6 |
| luxr family transcriptional regulator | EDI29_05925 | Not Available | Positive | 1316212 - 1316757 | 20692.0 |
| biosynthetic arginine decarboxylase | EDI29_05930 | Not Available | Negative | 1316815 - 1318794 | 74347.3 |
| duf2684 family protein | EDI29_05935 | Not Available | Negative | 1319335 - 1319601 | 10021.3 |
| methionine adenosyltransferase | EDI29_05940 | Not Available | Positive | 1319510 - 1320661 | 41787.6 |
| sprt family zinc-dependent metalloprotease | EDI29_05945 | Not Available | Positive | 1320964 - 1321476 | 19998.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
