Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | EDI29_05850 | Not Available | Positive | 1298732 - 1299832 | 39246.5 |
| smp-30/gluconolactonase/lre family protein | EDI29_05855 | Not Available | Positive | 1299847 - 1300692 | 31169.6 |
| 3-dehydro-l-gulonate 2-dehydrogenase | EDI29_05860 | Not Available | Positive | 1300950 - 1301948 | 36634.0 |
| duf386 domain-containing protein | EDI29_05865 | Not Available | Positive | 1301963 - 1302436 | 17810.0 |
| mfs transporter | EDI29_05870 | Not Available | Positive | 1302558 - 1303859 | 47187.8 |
| carbohydrate kinase | EDI29_05875 | Not Available | Positive | 1303856 - 1305364 | 54772.3 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | EDI29_05880 | Not Available | Positive | 1305361 - 1306017 | 23647.4 |
| l-ribulose-5-phosphate 3-epimerase | EDI29_05885 | Not Available | Positive | 1306019 - 1306879 | 32373.9 |
| l-ribulose-5-phosphate 4-epimerase | EDI29_05890 | Not Available | Positive | 1306873 - 1307574 | 25984.0 |
| small-conductance mechanosensitive channel mscs | EDI29_05895 | Not Available | Negative | 1307621 - 1308472 | 30582.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
