Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDI29_05600 | Not Available | Negative | 1240952 - 1241146 | 6884.14 |
| type 3 dihydrofolate reductase | EDI29_05605 | Not Available | Negative | 1241821 - 1242303 | 18024.3 |
| threonine/serine exporter | EDI29_05610 | Not Available | Negative | 1242414 - 1242884 | 16861.5 |
| threonine/serine exporter thre family protein | EDI29_05615 | Not Available | Negative | 1242875 - 1243648 | 27635.5 |
| lyse family translocator | EDI29_05620 | Not Available | Positive | 1243870 - 1244484 | 22228.1 |
| drug:proton antiporter | EDI29_05625 | Not Available | Negative | 1244567 - 1244935 | 13923.5 |
| yafy family transcriptional regulator | EDI29_05630 | Not Available | Negative | 1245033 - 1245722 | 26527.2 |
| carbamoyl-phosphate synthase large subunit | EDI29_05635 | Not Available | Negative | 1245884 - 1249108 | 117824.0 |
| carbamoyl-phosphate synthase small subunit | EDI29_05640 | Not Available | Negative | 1249123 - 1250271 | 41506.3 |
| 4-hydroxy-tetrahydrodipicolinate reductase | EDI29_05645 | Not Available | Negative | 1250717 - 1251538 | 28850.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
