Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator sgrr | EDI29_05500 | Not Available | Positive | 1214791 - 1216449 | 64911.8 |
| thiamine abc transporter substrate binding subunit | EDI29_05505 | Not Available | Positive | 1216631 - 1217647 | 37572.7 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | EDI29_05510 | Not Available | Positive | 1217623 - 1219230 | 59522.7 |
| thiamine abc transporter atp-binding protein thiq | EDI29_05515 | Not Available | Positive | 1219217 - 1219921 | 25837.4 |
| xylan 1,4-beta-xylosidase | EDI29_05520 | Not Available | Negative | 1219932 - 1221554 | 60434.6 |
| ilvb operon leader peptide ivbl | EDI29_05525 | Not Available | Positive | 1221823 - 1221930 | 3538.32 |
| acetolactate synthase large subunit | EDI29_05530 | Not Available | Positive | 1222026 - 1223705 | 59625.0 |
| acetolactate synthase 1 small subunit | EDI29_05535 | Not Available | Positive | 1223711 - 1224004 | 11192.6 |
| deda family protein | EDI29_05540 | Not Available | Negative | 1224040 - 1224810 | 28520.9 |
| ggdef domain-containing protein | EDI29_05545 | Not Available | Positive | 1224958 - 1226538 | 59576.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
