Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | EDI29_05450 | Not Available | Positive | 1204456 - 1206054 | 58625.4 |
| 3-isopropylmalate dehydrogenase | EDI29_05455 | Not Available | Positive | 1206054 - 1207145 | 39204.0 |
| 3-isopropylmalate dehydratase large subunit | EDI29_05460 | Not Available | Positive | 1207148 - 1208548 | 49953.9 |
| 3-isopropylmalate dehydratase small subunit | EDI29_05465 | Not Available | Positive | 1208562 - 1209164 | 22527.6 |
| azld domain-containing protein | EDI29_05470 | Not Available | Negative | 1209235 - 1209546 | 11479.8 |
| branched-chain amino acid abc transporter permease | EDI29_05475 | Not Available | Negative | 1209543 - 1210277 | 26323.7 |
| arac family transcriptional regulator | EDI29_05480 | Not Available | Negative | 1210384 - 1211220 | 31715.1 |
| hamp domain-containing protein | EDI29_05485 | Not Available | Negative | 1211423 - 1213042 | 58425.3 |
| hypothetical protein | EDI29_05490 | Not Available | Positive | 1213830 - 1214390 | 20126.7 |
| glucose uptake inhibitor sgrt | EDI29_05495 | Not Available | Negative | 1214536 - 1214700 | 6712.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
