Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | EDI29_05250 | Not Available | Negative | 1156794 - 1158686 | 65781.0 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | EDI29_05255 | Not Available | Negative | 1158701 - 1161364 | 99647.8 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | EDI29_05260 | Not Available | Negative | 1161508 - 1162272 | 29131.0 |
| amino acid permease | EDI29_05265 | Not Available | Positive | 1162932 - 1164290 | 48943.4 |
| beta-lactamase regulator ampe | EDI29_05270 | Not Available | Negative | 1164374 - 1165228 | 31819.1 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | EDI29_05275 | Not Available | Negative | 1165225 - 1165800 | 21496.2 |
| nucleoside-specific channel-forming protein tsx | EDI29_05280 | Not Available | Positive | 1166218 - 1167078 | 32257.1 |
| carboxylating nicotinate-nucleotide diphosphorylase | EDI29_05285 | Not Available | Positive | 1167223 - 1168113 | 32158.4 |
| prepilin peptidase-dependent pilin | EDI29_05290 | Not Available | Positive | 1168424 - 1168870 | 15728.9 |
| type ii secretion system protein gspe | EDI29_05295 | Not Available | Positive | 1168873 - 1170345 | 53746.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
