Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | EDI29_04900 | Not Available | Negative | 1077871 - 1078908 | 37715.9 |
| carbohydrate abc transporter permease | EDI29_04905 | Not Available | Negative | 1078908 - 1079960 | 39372.3 |
| sugar abc transporter permease | EDI29_04910 | Not Available | Negative | 1079969 - 1080967 | 36896.0 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | EDI29_04915 | Not Available | Negative | 1080991 - 1082082 | 40473.2 |
| glycoside hydrolase family 105 protein | EDI29_04920 | Not Available | Negative | 1082085 - 1083191 | 41032.9 |
| hypothetical protein | EDI29_04925 | Not Available | Negative | 1083193 - 1085655 | 92593.9 |
| carbohydrate abc transporter substrate-binding protein | EDI29_04930 | Not Available | Positive | 1086097 - 1087404 | 48865.2 |
| glucosamine kinase | EDI29_04935 | Not Available | Positive | 1087401 - 1087952 | 20004.9 |
| glucosamine kinase | EDI29_04940 | Not Available | Positive | 1087949 - 1088854 | 31712.4 |
| metallophosphoesterase | EDI29_04945 | Not Available | Positive | 1088896 - 1090719 | 67688.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
