Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | EDI29_04845 | Not Available | Negative | 1065109 - 1066494 | 49974.5 |
| lrp/asnc family transcriptional regulator | EDI29_04850 | Not Available | Positive | 1066856 - 1067335 | 17536.3 |
| yitt family protein | EDI29_04855 | Not Available | Positive | 1067587 - 1068201 | 22305.0 |
| aspartate/tyrosine/aromatic aminotransferase | EDI29_04860 | Not Available | Positive | 1068261 - 1069454 | 43875.4 |
| m48 family peptidase | EDI29_04865 | Not Available | Positive | 1069587 - 1070090 | 19605.7 |
| yjbq family protein | EDI29_04870 | Not Available | Negative | 1070653 - 1071072 | 15750.9 |
| excinuclease abc subunit uvra | EDI29_04875 | Not Available | Negative | 1071089 - 1073923 | 104085.0 |
| single-stranded dna-binding protein ssb1 | EDI29_04880 | Not Available | Positive | 1074173 - 1074715 | 19100.2 |
| amidohydrolase | EDI29_04885 | Not Available | Positive | 1074949 - 1076790 | 66102.6 |
| hypothetical protein | EDI29_04895 | Not Available | Positive | 1077273 - 1077863 | 22241.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
