Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpa family phage regulatory protein | EDI29_04580 | Not Available | Positive | 1009762 - 1009974 | 8278.08 |
| type ii toxin-antitoxin system hica family toxin | EDI29_04585 | Not Available | Positive | 1010171 - 1010431 | 9583.37 |
| hypothetical protein | EDI29_04590 | Not Available | Positive | 1010424 - 1012148 | 63097.3 |
| duf2857 domain-containing protein | EDI29_04595 | Not Available | Positive | 1012160 - 1012720 | 20612.8 |
| hypothetical protein | EDI29_04600 | Not Available | Positive | 1012720 - 1013934 | 44879.7 |
| tigr03761 family integrating conjugative element protein | EDI29_04605 | Not Available | Positive | 1014211 - 1015029 | 30126.3 |
| duf3158 family protein | EDI29_04610 | Not Available | Positive | 1015026 - 1015634 | 22124.8 |
| single-stranded dna-binding protein | EDI29_04615 | Not Available | Positive | 1015637 - 1016038 | 15038.3 |
| dna topoisomerase iii | EDI29_04620 | Not Available | Positive | 1016206 - 1018218 | 73574.5 |
| duf3577 domain-containing protein | EDI29_04635 | Not Available | Positive | 1019474 - 1020394 | 33461.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
