Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | EDI29_04530 | Not Available | Negative | 998226 - 998639 | 15583.2 |
| duf3861 family protein | EDI29_04535 | Not Available | Positive | 998721 - 998984 | 10260.6 |
| catalase/peroxidase hpi | EDI29_04540 | Not Available | Negative | 999057 - 1001231 | 80536.4 |
| metallophosphoesterase | EDI29_04545 | Not Available | Negative | 1001596 - 1002726 | 41034.5 |
| deor/glpr transcriptional regulator | EDI29_04550 | Not Available | Positive | 1002979 - 1003752 | 28197.0 |
| had-iib family hydrolase | EDI29_04555 | Not Available | Negative | 1003800 - 1004591 | 29218.9 |
| qace family quaternary ammonium compound efflux smr transporter | EDI29_04560 | Not Available | Negative | 1005121 - 1005435 | 10990.1 |
| Trna-val | Not Available | Not Available | Positive | 1005872 - 1005948 | Not Available |
| duf4102 domain-containing protein | EDI29_04570 | Not Available | Positive | 1006176 - 1008020 | 70214.8 |
| lysr family transcriptional regulator | EDI29_04575 | Not Available | Positive | 1008381 - 1009319 | 35535.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
