Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | EDI29_04425 | Not Available | Negative | 979889 - 980572 | 26432.7 |
| lysozyme inhibitor | EDI29_04430 | Not Available | Negative | 980680 - 980997 | 11537.0 |
| anhydro-n-acetylmuramic acid kinase | EDI29_04435 | Not Available | Negative | 981095 - 982207 | 39267.7 |
| glycine zipper 2tm domain-containing protein | EDI29_04440 | Not Available | Positive | 982556 - 983023 | 15517.6 |
| transcriptional regulator slya | EDI29_04445 | Not Available | Negative | 983155 - 983592 | 16469.2 |
| duf1289 domain-containing protein | EDI29_04450 | Not Available | Negative | 983824 - 984063 | 9195.89 |
| lactoylglutathione lyase | EDI29_04455 | Not Available | Positive | 984365 - 984772 | 14814.5 |
| ribonuclease t | EDI29_04460 | Not Available | Positive | 984920 - 985591 | 24213.6 |
| grx4 family monothiol glutaredoxin | EDI29_04465 | Not Available | Negative | 985699 - 986049 | 13079.7 |
| peptidoglycan endopeptidase | EDI29_04470 | Not Available | Positive | 986389 - 987240 | 31632.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
