Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter substrate-binding protein | EDI29_04115 | Not Available | Negative | 910903 - 912519 | 60179.0 |
| murein tripeptide amidase mpaa | EDI29_04120 | Not Available | Positive | 912684 - 913403 | 25841.5 |
| thiol peroxidase | EDI29_04125 | Not Available | Positive | 913483 - 913986 | 17572.9 |
| transcriptional regulator tyrr | EDI29_04130 | Not Available | Negative | 914038 - 915606 | 58567.8 |
| m20/m25/m40 family metallo-hydrolase | EDI29_04135 | Not Available | Negative | 915743 - 917287 | 55407.4 |
| laci family transcriptional regulator | EDI29_04140 | Not Available | Negative | 917433 - 918437 | 36948.4 |
| pts lactose/cellobiose transporter subunit iia | EDI29_04145 | Not Available | Negative | 918510 - 918815 | 11264.7 |
| pts sugar transporter subunit iic | EDI29_04150 | Not Available | Negative | 918848 - 920143 | 47084.1 |
| pts sugar transporter subunit iib | EDI29_04155 | Not Available | Negative | 920165 - 920470 | 11323.1 |
| mandelate racemase/muconate lactonizing enzyme family protein | EDI29_04160 | Not Available | Negative | 920494 - 921654 | 43584.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
