Neorhizobium sp. JUb45

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Neorhizobium

Description

Neorhizobium sp. JUb45 is characterized by having a single replicon, indicating a streamlined genomic organization that can be advantageous for its survival and function in various environments. The genomic data of this strain is cataloged under the accession number SLYW00000000.1, which serves as a reference for researchers seeking to study its genetic makeup and potential applications. As a member of the Neorhizobium genus, JUb45 is likely to be involved in symbiotic relationships with leguminous plants, contributing to nitrogen fixation. This trait is essential for soil fertility and can support plant growth, making Neorhizobium sp. JUb45 relevant in agricultural contexts. The ability to fix nitrogen is a critical ecological function that supports not only the host plants but also contributes to broader soil health and ecosystem productivity. The presence of a single replicon may suggest adaptations that enhance the efficiency of nitrogen fixation and metabolic processes under varying environmental conditions. Understanding the genomic features of Neorhizobium sp. JUb45 can provide insights into its ecological roles and potential benefits in sustainable agricultural practices, highlighting the importance of symbiotic microorganisms in enhancing soil fertility and supporting crop yields.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusNeorhizobium
SpeciesNeorhizobium sp. JUb45
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Neorhizobium sp. JUb45 Ga0304812_132, whole genome shotgun

Gene Summary

Adenine Count

1243936 bp

Thymine Count

1272176 bp

Guanine Count

1868639 bp

Cytosine Count

1830110 bp

Genome Length

6214861 bp

Protein-coding Genes

5785 genes

Non-Coding Genes

171 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two-component system c4-dicarboxylate transport response regulator dctdEDF70_101160Not AvailablePositive187640 - 18898649506.7
tripartite-type tricarboxylate transporter receptor subunit tctcEDF70_101161Not AvailablePositive189316 - 19029934143.2
tripartite tricarboxylate transporter tctb family proteinEDF70_101162Not AvailablePositive190575 - 19103616581.1
tcta family transporterEDF70_101163Not AvailablePositive191049 - 19255452516.6
laci family transcriptional regulatorEDF70_101164Not AvailableNegative192727 - 19378539019.1
carbohydrate abc transporter substrate-binding protein (cut1 family)EDF70_101165Not AvailablePositive194031 - 19528744687.2
carbohydrate abc transporter membrane protein 1 (cut1 family)EDF70_101166Not AvailablePositive195544 - 19645833927.4
carbohydrate abc transporter membrane protein 2 (cut1 family)EDF70_101167Not AvailablePositive196458 - 19734231800.8
carbohydrate abc transporter atp-binding protein (cut1 family)EDF70_101168Not AvailablePositive197347 - 19845339633.2
two-component sensor histidine kinaseEDF70_101169Not AvailablePositive198745 - 20044562413.1

Displaying genes 321 – 330 of 5956 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.