Sphingomonas sp. JUb134

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. JUb134 is a rod-shaped bacterium characterized by the presence of flagella, which likely facilitates its motility. This organism has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The type strain is documented under the accession number SLYP00000000.2. The Sphingomonas genus is known for its ecological versatility and ability to degrade complex organic compounds, which suggests that Sphingomonas sp. JUb134 may play a role in bioremediation or nutrient cycling within its habitat. The presence of flagella implies a capability for movement toward favorable conditions or away from harmful ones, enhancing its survival prospects in dynamic environments. Understanding the specific traits of Sphingomonas sp. JUb134 provides insights into its potential ecological roles, particularly in relation to environmental bioremediation processes. The ability to adapt and thrive in different ecological niches may be critical for its survival and functional contributions to microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. JUb134
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. JUb134
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. JUb134 Ga0439394_04, whole genome shotgun

Gene Summary

Adenine Count

667231 bp

Thymine Count

668851 bp

Guanine Count

1389618 bp

Cytosine Count

1389862 bp

Genome Length

4115562 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
muramoyltetrapeptide carboxypeptidaseEDF69_003063Not AvailablePositive3272470 - 327328228732.6
putative zinc-type alcohol dehydrogenase-like proteinEDF69_003064Not AvailableNegative3273324 - 327439137816.0
threonyl-trna synthetaseEDF69_003065Not AvailablePositive3274564 - 327657675910.2
translation initiation factor if-3EDF69_003066Not AvailablePositive3276734 - 327726720305.9
hypothetical proteinEDF69_003067Not AvailablePositive3277506 - 327863941555.5
[protein-pii] uridylyltransferaseEDF69_003068Not AvailableNegative3278797 - 3281571103142.0
molecular chaperone grpeEDF69_003069Not AvailableNegative3281603 - 328216020253.8
heat-inducible transcriptional repressorEDF69_003070Not AvailableNegative3282177 - 328322637066.8
hypothetical proteinEDF69_003071Not AvailableNegative3283482 - 328400918340.6
ribonuclease phEDF69_003072Not AvailablePositive3284093 - 328480925286.2

Displaying genes 3161 – 3170 of 3972 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.