Sphingomonas sp. JUb134

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. JUb134 is a rod-shaped bacterium characterized by the presence of flagella, which likely facilitates its motility. This organism has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The type strain is documented under the accession number SLYP00000000.2. The Sphingomonas genus is known for its ecological versatility and ability to degrade complex organic compounds, which suggests that Sphingomonas sp. JUb134 may play a role in bioremediation or nutrient cycling within its habitat. The presence of flagella implies a capability for movement toward favorable conditions or away from harmful ones, enhancing its survival prospects in dynamic environments. Understanding the specific traits of Sphingomonas sp. JUb134 provides insights into its potential ecological roles, particularly in relation to environmental bioremediation processes. The ability to adapt and thrive in different ecological niches may be critical for its survival and functional contributions to microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. JUb134
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. JUb134
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. JUb134 Ga0439394_04, whole genome shotgun

Gene Summary

Adenine Count

667231 bp

Thymine Count

668851 bp

Guanine Count

1389618 bp

Cytosine Count

1389862 bp

Genome Length

4115562 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-l-fucosidaseEDF69_001965Not AvailableNegative2121352 - 212327470335.0
putative alpha-1,2-mannosidaseEDF69_001966Not AvailableNegative2123296 - 212561784710.7
meiotically up-regulated gene 157 (mug157) proteinEDF69_001967Not AvailableNegative2125619 - 212704652827.9
beta-glucosidaseEDF69_001968Not AvailableNegative2127043 - 212961090800.7
beta-mannosidaseEDF69_001969Not AvailableNegative2129607 - 213219595102.8
hexosaminidaseEDF69_001970Not AvailableNegative2132192 - 213451982513.5
gntr family transcriptional regulatorEDF69_001971Not AvailablePositive2134749 - 213548626703.7
beta-galactosidaseEDF69_001972Not AvailablePositive2135545 - 2138445105275.0
pts system n-acetylglucosamine-specific iic componentEDF69_001973Not AvailableNegative2138684 - 214039658770.9
phosphocarrier protein fpr/phosphocarrier proteinEDF69_001974Not AvailableNegative2140393 - 214293087468.3

Displaying genes 2091 – 2100 of 3972 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.