Novosphingobium sp. PhB57

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PhB57 is a bacterium characterized by the presence of flagella, which suggests a capability for motility. This trait may enable the organism to navigate its environment for nutrient acquisition or to escape unfavorable conditions. The bacterium contains a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability and efficiency in various ecological niches. The genome of Novosphingobium sp. PhB57 is cataloged under the accession number SMBO00000000.1, which allows for further molecular analysis and comparative studies with other species within the Novosphingobium genus. These insights could enhance understanding of genetic diversity and functional capabilities among related microorganisms. Ecologically, the presence of flagella in Novosphingobium sp. PhB57 may play a significant role in its interactions within microbial communities, particularly in aquatic environments where motility can be crucial for survival and competition. The ability to move towards nutrient sources or away from harmful substances can influence the organism's ecological success and its role in biogeochemical cycles. Overall, Novosphingobium sp. PhB57 exemplifies the adaptability of bacteria, with traits that facilitate its survival and function within diverse ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PhB57
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PhB57 Ga0304884_143, whole genome shotgun

Gene Summary

Adenine Count

1017561 bp

Thymine Count

1020625 bp

Guanine Count

1901985 bp

Cytosine Count

1908217 bp

Genome Length

5848483 bp

Protein-coding Genes

5067 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipoprotein-anchoring transpeptidase erfk/srfkEDF58_10167Not AvailableNegative86629 - 8728822875.6
tetr family transcriptional regulatorEDF58_10168Not AvailableNegative87478 - 8821526984.2
iron complex outermembrane receptor proteinEDF58_10169Not AvailablePositive88328 - 9073085320.0
pimeloyl-acp methyl ester carboxylesteraseEDF58_10170Not AvailablePositive90820 - 9170131503.8
sugar phosphate permeaseEDF58_10171Not AvailablePositive91831 - 9311445174.0
agza family xanthine/uracil permease-like mfs transporterEDF58_10172Not AvailablePositive93272 - 9463647062.7
guanine deaminaseEDF58_10173Not AvailablePositive94707 - 9599346139.8
adenosine deaminaseEDF58_10174Not AvailablePositive95990 - 9700636571.3
uncharacterized protein duf4269EDF58_10175Not AvailablePositive97129 - 9753614713.7
xanthine phosphoribosyltransferase/hypothetical proteinEDF58_10176Not AvailableNegative97546 - 9807919802.5

Displaying genes 71 – 80 of 5140 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.