Novosphingobium sp. PhB57

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PhB57 is a bacterium characterized by the presence of flagella, which suggests a capability for motility. This trait may enable the organism to navigate its environment for nutrient acquisition or to escape unfavorable conditions. The bacterium contains a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability and efficiency in various ecological niches. The genome of Novosphingobium sp. PhB57 is cataloged under the accession number SMBO00000000.1, which allows for further molecular analysis and comparative studies with other species within the Novosphingobium genus. These insights could enhance understanding of genetic diversity and functional capabilities among related microorganisms. Ecologically, the presence of flagella in Novosphingobium sp. PhB57 may play a significant role in its interactions within microbial communities, particularly in aquatic environments where motility can be crucial for survival and competition. The ability to move towards nutrient sources or away from harmful substances can influence the organism's ecological success and its role in biogeochemical cycles. Overall, Novosphingobium sp. PhB57 exemplifies the adaptability of bacteria, with traits that facilitate its survival and function within diverse ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PhB57
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PhB57 Ga0304884_143, whole genome shotgun

Gene Summary

Adenine Count

1017561 bp

Thymine Count

1020625 bp

Guanine Count

1901985 bp

Cytosine Count

1908217 bp

Genome Length

5848483 bp

Protein-coding Genes

5067 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidase ypeb-like proteinEDF58_1011064Not AvailableNegative1163678 - 116400111554.0
atp-binding cassette subfamily f protein uupEDF58_1011065Not AvailablePositive1164154 - 116594765778.2
helix-turn-helix proteinEDF58_1011066Not AvailablePositive1166098 - 116667020742.4
glycosyltransferase involved in cell wall biosynthesisEDF58_1011067Not AvailablePositive1166694 - 116790543317.6
protein translocase subunit secfEDF58_1011068Not AvailableNegative1167965 - 116895136371.9
preprotein translocase subunit secdEDF58_1011069Not AvailableNegative1168964 - 117057757211.8
protein translocase subunit yajcEDF58_1011070Not AvailableNegative1170667 - 117100211863.7
Trna-proNot AvailableNot AvailablePositive1171297 - 1171370Not Available
hypothetical proteinEDF58_1011072Not AvailablePositive1171551 - 11717667995.22
holin (3tms family)EDF58_1011073Not AvailablePositive1171907 - 117232015116.5

Displaying genes 1071 – 1080 of 5140 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.