Novosphingobium sp. PhB57

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PhB57 is a bacterium characterized by the presence of flagella, which suggests a capability for motility. This trait may enable the organism to navigate its environment for nutrient acquisition or to escape unfavorable conditions. The bacterium contains a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability and efficiency in various ecological niches. The genome of Novosphingobium sp. PhB57 is cataloged under the accession number SMBO00000000.1, which allows for further molecular analysis and comparative studies with other species within the Novosphingobium genus. These insights could enhance understanding of genetic diversity and functional capabilities among related microorganisms. Ecologically, the presence of flagella in Novosphingobium sp. PhB57 may play a significant role in its interactions within microbial communities, particularly in aquatic environments where motility can be crucial for survival and competition. The ability to move towards nutrient sources or away from harmful substances can influence the organism's ecological success and its role in biogeochemical cycles. Overall, Novosphingobium sp. PhB57 exemplifies the adaptability of bacteria, with traits that facilitate its survival and function within diverse ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PhB57
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PhB57 Ga0304884_143, whole genome shotgun

Gene Summary

Adenine Count

1017561 bp

Thymine Count

1020625 bp

Guanine Count

1901985 bp

Cytosine Count

1908217 bp

Genome Length

5848483 bp

Protein-coding Genes

5067 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glyoxalase/bleomycin resistance protein/dioxygenase superfamily proteinEDF58_1011014Not AvailablePositive1107708 - 110818118204.8
fo synthase subunit 1 /fo synthase subunit 2EDF58_1011015Not AvailableNegative1108299 - 111061783152.9
lppg:fo 2-phospho-l-lactate transferaseEDF58_1011016Not AvailableNegative1110629 - 111158533946.9
coenzyme f420-0:l-glutamate ligase/coenzyme f420-1:gamma-l-glutamate ligaseEDF58_1011017Not AvailableNegative1111582 - 111231625452.4
reduced coenzyme f420:nadp oxidoreductaseEDF58_1011018Not AvailablePositive1112464 - 111311421920.3
2-phospho-l-lactate guanylyltransferaseEDF58_1011019Not AvailablePositive1113111 - 111375522962.0
nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family)EDF58_1011020Not AvailablePositive1113769 - 111464730753.7
putative f420-dependent oxidoreductaseEDF58_1011021Not AvailablePositive1114644 - 111556433645.0
phosphoglucomutaseEDF58_1011022Not AvailableNegative1115568 - 111721758150.6
dna repair protein radcEDF58_1011023Not AvailableNegative1117315 - 111774916079.4

Displaying genes 1021 – 1030 of 5140 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.