Sphingomonas populi

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas populi is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This organism possesses a single replicon, indicating its genetic structure is organized around one main chromosome. The accession number for Sphingomonas populi is SGIS00000000.1, which is used for referencing its genomic data in scientific databases. Biologically, the presence of flagella suggests that Sphingomonas populi may exhibit active movement in its environment, potentially aiding in its colonization and interaction with various ecological niches. This capability could enhance its adaptability in diverse habitats, including soil and water, where it may play a role in the decomposition of organic matter or contribute to nutrient cycling. The ecological implications of Sphingomonas populi's motility and metabolic activities could be significant, as it may influence microbial community dynamics and ecosystem functioning. Its ability to thrive in different environments may also suggest a resilience to changing conditions, highlighting its potential importance in maintaining ecological balance. Overall, the traits of Sphingomonas populi underline its role in microbial ecology and its potential contributions to environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas populi
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas populi
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas populi strain 3-7 Scaffold180, whole genome shotgun

Gene Summary

Adenine Count

908557 bp

Thymine Count

910305 bp

Guanine Count

1695188 bp

Cytosine Count

1691925 bp

Genome Length

5219573 bp

Protein-coding Genes

4685 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribonuclease dEWE75_04530Not AvailablePositive992941 - 99356122851.2
lps export abc transporter periplasmic protein lptcEWE75_04535Not AvailablePositive993569 - 99420722872.8
osta family proteinEWE75_04540Not AvailablePositive994213 - 99469517133.4
lps export abc transporter atp-binding proteinEWE75_04545Not AvailablePositive994885 - 99560726245.1
rna polymerase sigma-54 factorEWE75_04550Not AvailablePositive995610 - 99712453906.1
ligase-associated dna damage response exonucleaseEWE75_04555Not AvailableNegative997131 - 99812936251.4
ligase-associated dna damage response dexh box helicaseEWE75_04560Not AvailablePositive998282 - 100068787817.7
hypothetical proteinEWE75_04565Not AvailablePositive1000833 - 100178333395.9
class i sam-dependent methyltransferaseEWE75_04570Not AvailableNegative1001786 - 100300945237.3
molybdopterin-binding proteinEWE75_04575Not AvailableNegative1003028 - 100378627625.3

Displaying genes 941 – 950 of 4762 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.