Sphingobacterium corticibacterium

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium corticibacterium is a rod-shaped bacterium characterized by its singular replicon, indicating a relatively simple genetic structure. This trait can influence its replication and adaptation processes. The organism is cataloged in the genetic database with the accession number SGIT00000000.1, which is crucial for researchers looking to study its genetic makeup or for comparative analyses with other bacterial species. As a member of the Sphingobacterium genus, S. corticibacterium may play a significant role in specific ecological niches, potentially contributing to the degradation of complex organic materials, although specific interactions or functions are not detailed in the provided information. The rod shape is typical for this genus and can affect its motility and environmental interactions. Understanding the characteristics of Sphingobacterium corticibacterium, such as its morphology and genetic structure, can provide insights into its ecological roles. The presence of a single replicon suggests a streamlined genetic approach that may confer advantages in certain environments, such as rapid adaptation to nutrient availability or environmental stresses. Further study of this organism could reveal its specific ecological functions, particularly in soil or other habitats where members of the Sphingobacterium genus are often found.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium corticibacterium
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium corticibacterium
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium corticibacterium strain 30C10-4-7 Scaffold11,

Gene Summary

Adenine Count

1494286 bp

Thymine Count

1489999 bp

Guanine Count

1038452 bp

Cytosine Count

1096949 bp

Genome Length

5120378 bp

Protein-coding Genes

4101 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ragb/susd family nutrient uptake outer membrane proteinEWE74_02850Not AvailableNegative700719 - 70226358017.6
tonb-dependent receptorEWE74_02855Not AvailableNegative702274 - 705342114688.0
transcriptional regulatorEWE74_02860Not AvailableNegative705618 - 708470109252.0
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseEWE74_02865Not AvailablePositive708731 - 70954629899.1
bifunctional riboflavin kinase/fad synthetaseEWE74_02870Not AvailableNegative709548 - 71052537151.3
trna pseudouridine(55) synthase trubEWE74_02875Not AvailableNegative710531 - 71126827657.0
undecaprenyl-diphosphate phosphataseEWE74_02880Not AvailableNegative711269 - 71206329040.7
duf3098 domain-containing proteinEWE74_02885Not AvailableNegative712066 - 7123089022.3
ftsx-like permease family proteinEWE74_02890Not AvailableNegative712421 - 71329933020.1
leucine--trna ligaseEWE74_02895Not AvailablePositive713502 - 716285106338.0

Displaying genes 571 – 580 of 4156 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.