Sphingobacterium corticibacterium

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium corticibacterium is a rod-shaped bacterium characterized by its singular replicon, indicating a relatively simple genetic structure. This trait can influence its replication and adaptation processes. The organism is cataloged in the genetic database with the accession number SGIT00000000.1, which is crucial for researchers looking to study its genetic makeup or for comparative analyses with other bacterial species. As a member of the Sphingobacterium genus, S. corticibacterium may play a significant role in specific ecological niches, potentially contributing to the degradation of complex organic materials, although specific interactions or functions are not detailed in the provided information. The rod shape is typical for this genus and can affect its motility and environmental interactions. Understanding the characteristics of Sphingobacterium corticibacterium, such as its morphology and genetic structure, can provide insights into its ecological roles. The presence of a single replicon suggests a streamlined genetic approach that may confer advantages in certain environments, such as rapid adaptation to nutrient availability or environmental stresses. Further study of this organism could reveal its specific ecological functions, particularly in soil or other habitats where members of the Sphingobacterium genus are often found.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium corticibacterium
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium corticibacterium
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium corticibacterium strain 30C10-4-7 Scaffold11,

Gene Summary

Adenine Count

1494286 bp

Thymine Count

1489999 bp

Guanine Count

1038452 bp

Cytosine Count

1096949 bp

Genome Length

5120378 bp

Protein-coding Genes

4101 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
restriction endonucleaseEWE74_05180Not AvailableNegative1262296 - 126377157662.1
hypothetical proteinEWE74_05185Not AvailableNegative1263774 - 126468535210.7
xre family transcriptional regulatorEWE74_05195Not AvailablePositive1266156 - 126649413074.8
dna cytosine methyltransferaseEWE74_05200Not AvailablePositive1266484 - 126752139064.7
duf3883 domain-containing proteinEWE74_05205Not AvailablePositive1267518 - 126895756449.0
dna cytosine methyltransferaseEWE74_05210Not AvailablePositive1268927 - 126996439264.4
hypothetical proteinEWE74_05215Not AvailableNegative1270071 - 12702928573.2
restriction endonucleaseEWE74_05220Not AvailableNegative1270318 - 127102827656.4
hypothetical proteinEWE74_05225Not AvailablePositive1271145 - 127148613147.7
very short patch repair endonucleaseEWE74_05230Not AvailablePositive1271569 - 127205119556.8

Displaying genes 1031 – 1040 of 4156 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.