Pseudogemmobacter humi

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pseudogemmobacter

Description

Pseudogemmobacter humi is a bacterial species characterized by a single replicon, which indicates a streamlined genetic structure that may contribute to its adaptability in various environments. The organism is cataloged under the accession number UXAW00000000.1, which provides a reference point for further genomic studies and analyses. As a member of the microbial community, Pseudogemmobacter humi is likely to play a role in soil ecosystems, given its name, which suggests a habitat associated with terrestrial environments. The presence of such bacteria in soil is crucial for various biological processes, including nutrient cycling and organic matter decomposition. By participating in these processes, Pseudogemmobacter humi could contribute to the maintenance of soil health and fertility. In summary, Pseudogemmobacter humi, with its single replicon and specific genomic reference, represents an important component of microbial diversity in soil ecosystems. Its ecological role highlights the significance of bacteria in sustaining the functionality and resilience of terrestrial environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPseudogemmobacter
SpeciesPseudogemmobacter humi
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xinfangfangia sp. CIP 111625 isolate aCIP111625 genome assembly,

Gene Summary

Adenine Count

745060 bp

Thymine Count

752325 bp

Guanine Count

1493490 bp

Cytosine Count

1483521 bp

Genome Length

4474616 bp

Protein-coding Genes

4162 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-deoxy-d-manno-octulosonic acid transferaseXINFAN_00999Not AvailablePositive1065920 - 106707440330.3
tetraacyldisaccharide 4'-kinaseXINFAN_01000Not AvailablePositive1067074 - 106806934972.7
1-deoxy-d-xylulose-5-phosphate synthaseXINFAN_01001Not AvailableNegative1068142 - 107006167696.7
farnesyl diphosphate synthaseXINFAN_01002Not AvailableNegative1070074 - 107094330235.2
exodeoxyribonuclease 7 small subunitXINFAN_01003Not AvailableNegative1070940 - 10711798475.16
histone deacetylase-like amidohydrolaseXINFAN_01004Not AvailableNegative1071191 - 107209931971.9
transcriptional regulatory protein omprXINFAN_01005Not AvailableNegative1072167 - 107286225923.6
marr family proteinXINFAN_01006Not AvailableNegative1072862 - 107335618606.3
branched-chain-amino-acid aminotransferaseXINFAN_01007Not AvailablePositive1073501 - 107436732170.4
organic hydroperoxide resistance protein ohrbXINFAN_01008Not AvailableNegative1074535 - 107496314773.6

Displaying genes 1071 – 1080 of 4252 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.