Marmoricola mangrovicus

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Marmoricola mangrovicus is a bacterial species characterized by a single replicon, indicating a streamlined genomic organization. The organism is cataloged under the accession number RDBE00000000.1. This accession provides a reference for studying its genetic and biochemical properties. Marmoricola mangrovicus is relevant in ecological contexts, particularly in mangrove ecosystems, which are known for their unique environmental conditions. The presence of this bacterium in mangrove habitats suggests that it may play a role in nutrient cycling and possibly in the degradation of organic materials within these complex ecosystems. Understanding the genomic structure and features of Marmoricola mangrovicus can contribute to broader ecological insights, particularly regarding its interactions within the mangrove microbiome and its potential applications in bioremediation or other environmental management strategies. The single replicon trait may facilitate efficient genetic regulation, potentially allowing it to adapt to the fluctuating conditions typical of mangrove environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides mangrovicus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides mangrovicus strain 4Q3S-7 scaffold1341, whole genome

Gene Summary

Adenine Count

575132 bp

Thymine Count

576281 bp

Guanine Count

1480556 bp

Cytosine Count

1475527 bp

Genome Length

4108260 bp

Protein-coding Genes

3882 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar abc transporter atp-binding proteinD9V37_06310Not AvailableNegative1271573 - 127240930050.2
abc transporter permeaseD9V37_06315Not AvailableNegative1272406 - 127344936311.9
sugar abc transporter substrate-binding proteinD9V37_06320Not AvailableNegative1273446 - 127442333584.6
gntr family transcriptional regulatorD9V37_06325Not AvailablePositive1274549 - 127527726784.2
5-dehydro-2-deoxygluconokinaseD9V37_06330Not AvailablePositive1275421 - 127638333436.6
deoxyribose-phosphate aldolaseD9V37_06335Not AvailablePositive1276380 - 127726431144.7
5-deoxy-glucuronate isomeraseD9V37_06340Not AvailablePositive1277261 - 127811530027.9
3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)D9V37_06345Not AvailablePositive1278112 - 127999566564.1
2-keto-myo-inositol dehydrataseD9V37_06350Not AvailablePositive1279992 - 128090633599.4
gntr family transcriptional regulatorD9V37_06355Not AvailableNegative1280903 - 128154123296.8

Displaying genes 1241 – 1250 of 3934 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.