Marmoricola mangrovicus

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Marmoricola mangrovicus is a bacterial species characterized by a single replicon, indicating a streamlined genomic organization. The organism is cataloged under the accession number RDBE00000000.1. This accession provides a reference for studying its genetic and biochemical properties. Marmoricola mangrovicus is relevant in ecological contexts, particularly in mangrove ecosystems, which are known for their unique environmental conditions. The presence of this bacterium in mangrove habitats suggests that it may play a role in nutrient cycling and possibly in the degradation of organic materials within these complex ecosystems. Understanding the genomic structure and features of Marmoricola mangrovicus can contribute to broader ecological insights, particularly regarding its interactions within the mangrove microbiome and its potential applications in bioremediation or other environmental management strategies. The single replicon trait may facilitate efficient genetic regulation, potentially allowing it to adapt to the fluctuating conditions typical of mangrove environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides mangrovicus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides mangrovicus strain 4Q3S-7 scaffold1341, whole genome

Gene Summary

Adenine Count

575132 bp

Thymine Count

576281 bp

Guanine Count

1480556 bp

Cytosine Count

1475527 bp

Genome Length

4108260 bp

Protein-coding Genes

3882 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family nad(p)-dependent oxidoreductaseD9V37_05485Not AvailableNegative1106684 - 110737023217.5
xre family transcriptional regulatorD9V37_05490Not AvailablePositive1107471 - 110831631250.3
hypothetical proteinD9V37_05495Not AvailableNegative1108357 - 110911226518.1
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtD9V37_05500Not AvailablePositive1109068 - 110974524069.2
yebc/pmpr family dna-binding transcriptional regulatorD9V37_05505Not AvailablePositive1109759 - 111052327043.5
crossover junction endodeoxyribonuclease ruvcD9V37_05510Not AvailablePositive1110699 - 111121718204.2
holliday junction branch migration protein ruvaD9V37_05515Not AvailablePositive1111214 - 111181320817.1
holliday junction branch migration dna helicase ruvbD9V37_05520Not AvailablePositive1111813 - 111288038346.1
preprotein translocase subunit yajcD9V37_05525Not AvailablePositive1112954 - 111332513251.1
protein translocase subunit secdD9V37_05530Not AvailablePositive1113330 - 111513561632.1

Displaying genes 1081 – 1090 of 3934 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.