Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Pigmentiphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Pigmentiphaga |
| Species | Pigmentiphaga humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848102 bp
Thymine Count
848000 bp
Guanine Count
1704798 bp
Cytosine Count
1718013 bp
Genome Length
5118913 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ureidoglycolate lyase | PIGHUM_00889 | Not Available | Positive | 969422 - 970345 | 33323.8 |
| tripartite tricarboxylate transporter family receptor | PIGHUM_00890 | Not Available | Positive | 970422 - 971396 | 34804.9 |
| cocaine esterase | PIGHUM_00891 | Not Available | Positive | 971405 - 973036 | 60786.8 |
| amidohydrolase | PIGHUM_00892 | Not Available | Positive | 973064 - 974041 | 36824.9 |
| carboxylesterase | PIGHUM_00893 | Not Available | Negative | 974028 - 974912 | 32092.0 |
| caax amino terminal protease self- immunity | PIGHUM_00894 | Not Available | Negative | 975025 - 975849 | 30552.0 |
| peptidyl-trna hydrolase | PIGHUM_00895 | Not Available | Negative | 975842 - 976435 | 21636.1 |
| putative hth-type transcriptional regulator ydfh | PIGHUM_00896 | Not Available | Positive | 976690 - 977385 | 25672.6 |
| tripartite tricarboxylate transporter family receptor | PIGHUM_00897 | Not Available | Positive | 977450 - 978430 | 34452.7 |
| 2-methylcitrate dehydratase | PIGHUM_00898 | Not Available | Positive | 978453 - 979826 | 48132.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
