Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Pigmentiphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Pigmentiphaga |
| Species | Pigmentiphaga humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848102 bp
Thymine Count
848000 bp
Guanine Count
1704798 bp
Cytosine Count
1718013 bp
Genome Length
5118913 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fic/doc family protein | PIGHUM_00879 | Not Available | Negative | 958850 - 959932 | 40325.3 |
| prophage cp4-57 integrase | PIGHUM_00880 | Not Available | Negative | 960279 - 961490 | 45593.9 |
| ribosome-binding atpase ychf | PIGHUM_00881 | Not Available | Negative | 961687 - 962778 | 39026.1 |
| sensor protein fixl | PIGHUM_00882 | Not Available | Positive | 962951 - 964453 | 52736.2 |
| tetrathionate response regulatory protein ttrr | PIGHUM_00883 | Not Available | Positive | 964450 - 965031 | 20771.2 |
| hypothetical protein | PIGHUM_00884 | Not Available | Positive | 965138 - 965623 | 15508.6 |
| hth-type transcriptional regulator dmlr | PIGHUM_00885 | Not Available | Negative | 965687 - 966574 | 32638.6 |
| tripartite tricarboxylate transporter family receptor | PIGHUM_00886 | Not Available | Positive | 966705 - 967787 | 38375.7 |
| cdp-6-deoxy-l-threo-d-glycero-4-hexulose-3- dehydrase reductase | PIGHUM_00887 | Not Available | Positive | 967784 - 968854 | 38931.6 |
| glyoxalase-like domain protein | PIGHUM_00888 | Not Available | Positive | 968873 - 969367 | 19126.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
