Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Pigmentiphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Pigmentiphaga |
| Species | Pigmentiphaga humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848102 bp
Thymine Count
848000 bp
Guanine Count
1704798 bp
Cytosine Count
1718013 bp
Genome Length
5118913 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter family receptor | PIGHUM_00869 | Not Available | Negative | 935906 - 936907 | 35526.0 |
| protocatechuate 4,5-dioxygenase beta chain | PIGHUM_00870 | Not Available | Negative | 936951 - 937955 | 36572.6 |
| amidohydrolase | PIGHUM_00871 | Not Available | Negative | 937971 - 939065 | 40657.0 |
| hypothetical protein | PIGHUM_00872 | Not Available | Positive | 940481 - 941623 | 41874.4 |
| tyrosine recombinase xerc | PIGHUM_00873 | Not Available | Positive | 942224 - 943087 | 32169.5 |
| hypothetical protein | PIGHUM_00874 | Not Available | Negative | 943105 - 943854 | 27115.7 |
| hypothetical protein | PIGHUM_00875 | Not Available | Negative | 943867 - 945612 | 64674.3 |
| putative type i restriction enzymep m protein | PIGHUM_00876 | Not Available | Negative | 945800 - 950767 | 185008.0 |
| rna polymerase-associated protein rapa | PIGHUM_00877 | Not Available | Negative | 950764 - 953574 | 104299.0 |
| putative atp-dependent helicase lhr | PIGHUM_00878 | Not Available | Negative | 953571 - 958838 | 197068.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
