Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Pigmentiphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Pigmentiphaga |
| Species | Pigmentiphaga humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848102 bp
Thymine Count
848000 bp
Guanine Count
1704798 bp
Cytosine Count
1718013 bp
Genome Length
5118913 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaconate coa-transferase subunit a | PIGHUM_00859 | Not Available | Positive | 925695 - 926654 | 34873.1 |
| glutaconate coa-transferase subunit b | PIGHUM_00860 | Not Available | Positive | 926677 - 927516 | 30308.1 |
| long-chain-fatty-acid--coa ligase fadd13 | PIGHUM_00861 | Not Available | Positive | 927577 - 929109 | 55384.6 |
| carboxylesterase nlhh | PIGHUM_00862 | Not Available | Positive | 929111 - 930043 | 33437.7 |
| taurine transporter substrate binding subunit | PIGHUM_00863 | Not Available | Positive | 930143 - 931177 | 37573.7 |
| aliphatic sulfonates import atp-binding protein ssub | PIGHUM_00864 | Not Available | Positive | 931168 - 932010 | 30958.5 |
| putative aliphatic sulfonates transport permease protein ssuc | PIGHUM_00865 | Not Available | Positive | 932007 - 932837 | 29801.0 |
| flavin reductase like domain protein | PIGHUM_00866 | Not Available | Positive | 932837 - 933454 | 21922.3 |
| nodulation protein d 2 | PIGHUM_00867 | Not Available | Negative | 933482 - 934429 | 36508.4 |
| phenoxybenzoate dioxygenase subunit alpha | PIGHUM_00868 | Not Available | Negative | 934601 - 935878 | 48855.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
