Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Pigmentiphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Pigmentiphaga |
| Species | Pigmentiphaga humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848102 bp
Thymine Count
848000 bp
Guanine Count
1704798 bp
Cytosine Count
1718013 bp
Genome Length
5118913 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated endonuclease cas6/csy4 | PIGHUM_00008 | Not Available | Positive | 8010 - 8567 | 20641.7 |
| alpha/beta hydrolase family protein | PIGHUM_00009 | Not Available | Negative | 8702 - 9550 | 31006.9 |
| tripartite tricarboxylate transporter family receptor | PIGHUM_00010 | Not Available | Negative | 9555 - 10514 | 33428.2 |
| vanillin dehydrogenase | PIGHUM_00011 | Not Available | Negative | 10557 - 12002 | 49749.9 |
| tripartite tricarboxylate transporter family receptor | PIGHUM_00012 | Not Available | Negative | 12044 - 13045 | 34495.8 |
| benzoylformate decarboxylase | PIGHUM_00013 | Not Available | Negative | 13095 - 14690 | 56304.0 |
| hth-type transcriptional regulator cynr | PIGHUM_00014 | Not Available | Positive | 14854 - 15768 | 33074.4 |
| hth-type transcriptional regulator gltc | PIGHUM_00015 | Not Available | Negative | 15779 - 16732 | 34097.7 |
| hypothetical protein | PIGHUM_00016 | Not Available | Negative | 16822 - 17130 | 10836.5 |
| inner membrane protein yidh | PIGHUM_00017 | Not Available | Negative | 17127 - 17468 | 12399.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
