Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Pigmentiphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Pigmentiphaga |
| Species | Pigmentiphaga humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848102 bp
Thymine Count
848000 bp
Guanine Count
1704798 bp
Cytosine Count
1718013 bp
Genome Length
5118913 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quercetin 2,3-dioxygenase | PIGHUM_00799 | Not Available | Positive | 864909 - 865793 | 31921.1 |
| tripartite tricarboxylate transporter family receptor | PIGHUM_00800 | Not Available | Positive | 865951 - 866919 | 33629.7 |
| hypothetical protein | PIGHUM_00801 | Not Available | Positive | 867049 - 867411 | 13635.1 |
| prc-barrel domain protein | PIGHUM_00802 | Not Available | Negative | 867469 - 867972 | 18107.1 |
| 2,3-dimethylmalate lyase | PIGHUM_00803 | Not Available | Negative | 868155 - 869012 | 30408.7 |
| peroxyureidoacrylate/ureidoacrylate amidohydrolase rutb | PIGHUM_00804 | Not Available | Negative | 869025 - 869657 | 21884.2 |
| homoaconitase small subunit | PIGHUM_00805 | Not Available | Negative | 869654 - 870166 | 18050.9 |
| 2,3-dimethylmalate dehydratase large subunit | PIGHUM_00806 | Not Available | Negative | 870351 - 871625 | 44863.8 |
| hth-type transcriptional repressor yvoa | PIGHUM_00807 | Not Available | Negative | 871802 - 872635 | 30962.3 |
| tripartite tricarboxylate transporter family receptor | PIGHUM_00808 | Not Available | Positive | 872688 - 873698 | 35154.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
