Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Pigmentiphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Pigmentiphaga |
| Species | Pigmentiphaga humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848102 bp
Thymine Count
848000 bp
Guanine Count
1704798 bp
Cytosine Count
1718013 bp
Genome Length
5118913 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic-ring-opening dioxygenase ligab, liga subunit | PIGHUM_00779 | Not Available | Positive | 845281 - 845583 | 11484.8 |
| 2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase | PIGHUM_00780 | Not Available | Positive | 845585 - 846418 | 29475.5 |
| transcriptional activator nphr | PIGHUM_00781 | Not Available | Positive | 846527 - 847492 | 36101.1 |
| chad domain protein | PIGHUM_00782 | Not Available | Negative | 847507 - 849069 | 58122.8 |
| cell division protein ftsx | PIGHUM_00783 | Not Available | Negative | 849166 - 850071 | 32627.1 |
| cell division atp-binding protein ftse | PIGHUM_00784 | Not Available | Negative | 850068 - 850763 | 24876.0 |
| hypothetical protein | PIGHUM_00785 | Not Available | Positive | 850817 - 850915 | 3342.99 |
| general l-amino acid-binding periplasmic protein aapj precursor | PIGHUM_00786 | Not Available | Positive | 850943 - 851962 | 36261.8 |
| putative glutamine abc transporter permease protein glnm | PIGHUM_00787 | Not Available | Positive | 851970 - 853127 | 40964.6 |
| inner membrane amino-acid abc transporter permease protein yhdy | PIGHUM_00788 | Not Available | Positive | 853124 - 854332 | 43424.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
