Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Pigmentiphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Pigmentiphaga |
| Species | Pigmentiphaga humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848102 bp
Thymine Count
848000 bp
Guanine Count
1704798 bp
Cytosine Count
1718013 bp
Genome Length
5118913 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroperoxy fatty acid reductase gpx1 | PIGHUM_00739 | Not Available | Positive | 803492 - 803989 | 18124.5 |
| nodulation protein d 2 | PIGHUM_00740 | Not Available | Negative | 804050 - 804988 | 34529.0 |
| benzoylformate decarboxylase | PIGHUM_00741 | Not Available | Positive | 805074 - 806696 | 57815.8 |
| vanillin dehydrogenase | PIGHUM_00742 | Not Available | Positive | 806773 - 808224 | 50105.1 |
| tripartite tricarboxylate transporter family receptor | PIGHUM_00743 | Not Available | Positive | 808245 - 809210 | 33624.1 |
| marr family protein | PIGHUM_00744 | Not Available | Negative | 809259 - 809735 | 17528.9 |
| 2,4-dichlorophenol 6-monooxygenase | PIGHUM_00745 | Not Available | Positive | 809805 - 811496 | 61401.7 |
| hydroxyquinol 1,2-dioxygenase | PIGHUM_00746 | Not Available | Positive | 811519 - 812382 | 31718.1 |
| maleylacetate reductase | PIGHUM_00747 | Not Available | Positive | 812393 - 813472 | 37955.7 |
| kynurenine formamidase | PIGHUM_00748 | Not Available | Positive | 813552 - 814178 | 22210.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
