Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Pigmentiphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Pigmentiphaga |
| Species | Pigmentiphaga humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848102 bp
Thymine Count
848000 bp
Guanine Count
1704798 bp
Cytosine Count
1718013 bp
Genome Length
5118913 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attr | Not Available | Not Available | Positive | 4829520 - 4829535 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 570 - 2097 | Not Available |
| integrase core domain protein | PIGHUM_00001 | Not Available | Negative | 34 - 726 | 25915.6 |
| transposase | PIGHUM_00002 | Not Available | Negative | 945 - 1268 | 12339.7 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2701 - 5577 | Not Available |
| integrase core domain protein | PIGHUM_00003 | Not Available | Negative | 1959 - 2768 | 31116.8 |
| transposase | PIGHUM_00004 | Not Available | Negative | 2795 - 3319 | 19725.7 |
| crispr-associated protein csy1 | PIGHUM_00005 | Not Available | Positive | 4601 - 5977 | 52035.9 |
| crispr-associated protein csy2 | PIGHUM_00006 | Not Available | Positive | 5974 - 6981 | 37823.9 |
| crispr-associated protein csy3 | PIGHUM_00007 | Not Available | Positive | 7005 - 8006 | 36757.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
