Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Pigmentiphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Pigmentiphaga |
| Species | Pigmentiphaga humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848102 bp
Thymine Count
848000 bp
Guanine Count
1704798 bp
Cytosine Count
1718013 bp
Genome Length
5118913 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| caffeine dehydrogenase subunit alpha | PIGHUM_00672 | Not Available | Positive | 728475 - 730838 | 83669.4 |
| carbon monoxide dehydrogenase subunit g (coxg) | PIGHUM_00673 | Not Available | Positive | 730858 - 731646 | 27269.8 |
| naphthalene 1,2-dioxygenase system ferredoxin subunit | PIGHUM_00674 | Not Available | Positive | 731712 - 732020 | 11389.3 |
| rhodocoxin reductase | PIGHUM_00675 | Not Available | Positive | 731995 - 733278 | 44433.7 |
| salicylate 5-hydroxylase, large oxygenase component | PIGHUM_00676 | Not Available | Positive | 733295 - 734596 | 49530.0 |
| anthranilate 1,2-dioxygenase small subunit | PIGHUM_00677 | Not Available | Positive | 734733 - 735254 | 19512.2 |
| amidohydrolase | PIGHUM_00678 | Not Available | Positive | 735268 - 736230 | 35731.6 |
| maleate isomerase | PIGHUM_00679 | Not Available | Positive | 736248 - 737003 | 27041.1 |
| n-formylmaleamate deformylase | PIGHUM_00680 | Not Available | Positive | 737064 - 737891 | 30031.7 |
| 2,5-dihydroxypyridine 5,6-dioxygenase | PIGHUM_00681 | Not Available | Positive | 737894 - 738925 | 36997.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
